about 10 years ago I built the combo version of this amp. There are a couple of "finicky" areas that took some time to troubleshoot during the build, but I ultimately got it sorted out. Not saying any of these would result in the symptoms your amp is experiencing, but may be worth looking into.
1. VRM - The way the MOSFET was integrated with the board was a little tricky in getting geometry of the MOSFET "legs" set correctly. Also, wiring of the VRM components on the board can get a little tight, with close positioning of the leads and possible contact.
2. Some builders have reported that the under-board 220K resistors R19 and R26 come loose.
3. The pull "tude" switch on the volume pot has some wiring on the DPDT that could make it easy to have cross contact. This switch is also susceptible to a lot of noise and I believe the build manual suggests short wire runs as possible.
4. An option on this amp is to wire the the OT primary switch which allows for EL34 use. Builders (including myself) have experienced arcing across this switch at full power levels. Trinity now recommends painting on some of that "liquid electrical tape" onto the contacts.
5. Check the speaker output jack wiring...it can be very tight as it is next to the tube sockets as well as the cathode resistor switch and (optional) OT primary switch.
It took me a while to get this amp quiet, but I finally did. There's a lot packed into that chassis. You may want to chopstick the wiring to see if the hum changes. Check all solder connections. Switch in a different pre-amp tube (just noticed your post that you've already done this...maybe over the time you haven't played it, it got bumped around a little?)